MLOC_29830 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)02.7458600
INF1Young developing inflorescences (5mm)2.6426501.792040
INF2Developing inflorescences (1-1.5 cm)0.9654680.96704900
ROORoots from the seedlings (10 cm shoot stage)01.5400200
NODDeveloping tillers at six leaf stage, 3rd internode04.437911.87160
CAR5Developing grain, bracts removed (5 DPA)03.370321.42320
CAR15Developing grain, bracts removed (15 DPA)2.918373.2836400



CDS Structure of MLOC_29830






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251173.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251173.1CUST_23411_PI427708080NoneNoneNone
MLOC_28170.1NoneAvailableNonecontig_18974 (Not mapped)
MLOC_29830.1NoneAvailableNonecontig_2040928 (Not mapped)
MLOC_46796.1NoneAvailableNonecontig_295738 (Mapped)
MLOC_46807.1NoneAvailableAvailablecontig_295895 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----