MLOC_29748 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.189985.654375.209694.7109
LEAShoots from the seedlings (10 cm shoot stage)6.17245.768726.995545.06388
INF1Young developing inflorescences (5mm)7.877897.842628.770596.85195
INF2Developing inflorescences (1-1.5 cm)11.291110.080510.903711.1922
ROORoots from the seedlings (10 cm shoot stage)4.249277.742993.766757.44354
NODDeveloping tillers at six leaf stage, 3rd internode7.204277.59039.8304321.4877
CAR5Developing grain, bracts removed (5 DPA)8.317298.910518.224157.92549
CAR15Developing grain, bracts removed (15 DPA)6.23457.619197.1587916.0133



CDS Structure of MLOC_29748






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK372952
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372952CUST_13849_PI427708083NoneNoneNone
MLOC_29748.1NoneAvailableAvailablecontig_203328 (Not mapped)
MLOC_31130.1NoneAvailableNonecontig_215989 (Mapped)
MLOC_35586.1NoneAvailableNonecontig_2502717 (Mapped)
MLOC_8267.1NoneAvailableNonecontig_1417882 (Not mapped)
MLOC_9049.1NoneAvailableNonecontig_148688 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----