- Predicted Gene MLOC_29562
MLOC_29562 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.99555 | 10.1629 | 9.36246 | 6.09191 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.7679 | 8.56952 | 10.2041 | 7.15126 |
| INF1 | Young developing inflorescences (5mm) | 20.1071 | 22.2301 | 24.726 | 12.8697 |
| INF2 | Developing inflorescences (1-1.5 cm) | 43.9069 | 38.3676 | 40.7452 | 32.3298 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.10234 | 9.60676 | 9.91434 | 7.36469 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.96744 | 12.4947 | 8.92118 | 34.9617 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 29.7899 | 29.6888 | 28.5545 | 19.4844 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 15.06 | 14.8577 | 15.9854 | 22.4111 |
CDS Structure of MLOC_29562
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_29562.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g53800.5 |
+3 |
4e-20 |
96 |
46/59 (78%) |
13103.m05883 protein periplasmic beta-glucosidase precursor, putative, expressed |
| TAIR PP10 |
AT5G04885.1 |
+3 |
7e-15 |
79 |
39/58 (67%) |
Glycosyl hydrolase family protein | chr5:1423369-1426628 FORWARD LENGTH=665 |