- Predicted Gene MLOC_29543
MLOC_29543 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.287351 | 0 | 0.35467 | 0.465526 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.66302 | 0.47335 | 1.69138 | 1.2437 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0.229362 | 0.262118 | 0.541388 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.857427 | 0.681671 | 1.51467 | 3.20414 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.706229 | 0 | 1.10269 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_29543
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_29543.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g49160.1 |
+1 |
4e-22 |
88 |
44/53 (83%) |
13106.m05248 protein thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT4G02530.1 |
+1 |
6e-16 |
70 |
32/52 (62%) |
chloroplast thylakoid lumen protein | chr4:1112335-1114005 REVERSE LENGTH=216 |