MLOC_29542 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.576043.347853.013440
LEAShoots from the seedlings (10 cm shoot stage)05.7147611.97630
INF1Young developing inflorescences (5mm)3.442595.2770410.09170
INF2Developing inflorescences (1-1.5 cm)12.902511.693916.93710
ROORoots from the seedlings (10 cm shoot stage)01.803275.616440
NODDeveloping tillers at six leaf stage, 3rd internode2.836211.826875.044840
CAR5Developing grain, bracts removed (5 DPA)10.047719.01387.182810
CAR15Developing grain, bracts removed (15 DPA)0.8146540.9710862.620730



CDS Structure of MLOC_29542






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK369543
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369543CUST_13788_PI427708083NoneNoneNone
MLOC_29542.1NoneAvailableNonecontig_201508 (Mapped)
MLOC_44405.1NoneAvailableAvailablecontig_274684 (Mapped)
MLOC_45235.1NoneAvailableNonecontig_276855 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----