MLOC_29521 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.2584310.2032440.172708
LEAShoots from the seedlings (10 cm shoot stage)0.246190.4808170.3865590.261054
INF1Young developing inflorescences (5mm)0.4053120.6492030.1657430.277096
INF2Developing inflorescences (1-1.5 cm)1.584120.8682090.6437811.09035
ROORoots from the seedlings (10 cm shoot stage)0.2432770.13722300.282275
NODDeveloping tillers at six leaf stage, 3rd internode0.1269610.3555010.07031210.806239
CAR5Developing grain, bracts removed (5 DPA)0.1223290.4368930.4191210.246129
CAR15Developing grain, bracts removed (15 DPA)0.142540.14460100.260845



CDS Structure of MLOC_29521






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_29521.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_29521.1CUST_4209_PI427708083AvailableAvailablecontig_201301 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g44160.3 -2 2e-20 89 39/48 (81%) 13112.m04664 protein oxidoreductase, putative, expressed
TAIR PP10 AT5G39940.2 -2 3e-29 114 62/125 (50%) FAD/NAD(P)-binding oxidoreductase family protein | chr5:15987649-15990508 FORWARD LENGTH=458