MLOC_29508 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)01.340200
INF2Developing inflorescences (1-1.5 cm)1.51732.124142.57790
ROORoots from the seedlings (10 cm shoot stage)1.64152000
NODDeveloping tillers at six leaf stage, 3rd internode00.4318471.395330
CAR5Developing grain, bracts removed (5 DPA)2.6097800.693830
CAR15Developing grain, bracts removed (15 DPA)2.017240.7666921.00320



CDS Structure of MLOC_29508






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373887
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373887CUST_25795_PI427708080NoneNoneNone
MLOC_1896.1NoneAvailableNonecontig_1169186 (Not mapped)
MLOC_26260.1NoneAvailableNonecontig_1744408 (Mapped)
MLOC_29508.1NoneAvailableNonecontig_2012068 (Mapped)
MLOC_31516.1NoneAvailableNonecontig_219765 (Mapped)
MLOC_41438.1NoneAvailableNonecontig_2588457 (Mapped)
MLOC_41954.1NoneAvailableNonecontig_2615475 (Not mapped)
MLOC_42260.1NoneAvailableNonecontig_263371 (Not mapped)
MLOC_46900.1NoneAvailableAvailablecontig_297417 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----