- Predicted Gene MLOC_29459
MLOC_29459 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_29459_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_29459_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.66824 | 2.32788 | 2.5022 | 2.50701 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.76983 | 4.11601 | 4.92479 | 4.12508 |
INF1 | Young developing inflorescences (5mm) | 3.16295 | 2.57475 | 3.08119 | 2.61436 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.93149 | 2.84194 | 2.78207 | 3.31098 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.08455 | 4.11172 | 3.20685 | 5.4035 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.88534 | 2.75988 | 3.81945 | 10.9967 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.53418 | 3.22168 | 3.28383 | 3.77917 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.97789 | 1.9163 | 1.79271 | 4.57655 |
CDS Structure of MLOC_29459
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_29459.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g15270.1 |
-1 |
5e-121 |
401 |
291/743 (39%) |
13107.m01600 protein RNA-binding region RNP-1, putative, expressed |
TAIR PP10 |
AT1G05970.2 |
-1 |
1e-43 |
160 |
75/184 (41%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:1816253-1816991 REVERSE LENGTH=200 |