- Predicted Gene MLOC_29398
MLOC_29398 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0.0591421 | 0.0749946 | 0.0992069 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.390249 | 0.264738 | 0.610684 | 0.43173 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.460647 | 0.661432 | 0.67805 | 1.27685 |
CDS Structure of MLOC_29398
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_29398.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g11614.1 |
+2 |
4e-39 |
141 |
90/173 (52%) |
13103.m01314 protein OsMADS1 - MADS-box family gene with MIKCc type-box, expressed |
| TAIR PP10 |
AT5G15800.1 |
+2 |
1e-17 |
81 |
52/146 (36%) |
| Symbols: SEP1, AGL2 | K-box region and MADS-box transcription factor family protein | chr5:5151594-5153767 REVERSE LENGTH=251 |