MLOC_29366 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.302522.303819.156119.5392
LEAShoots from the seedlings (10 cm shoot stage)22.94485.918958.1378911.5855
INF1Young developing inflorescences (5mm)11.20288.856017.646857.84119
INF2Developing inflorescences (1-1.5 cm)7.827929.68418.074889.56445
ROORoots from the seedlings (10 cm shoot stage)5.0907316.01812.774516.889
NODDeveloping tillers at six leaf stage, 3rd internode17.980214.99978.3335350.2643
CAR5Developing grain, bracts removed (5 DPA)22.951229.450526.420325.2078
CAR15Developing grain, bracts removed (15 DPA)0.6150982.262460.6918992.85764



CDS Structure of MLOC_29366






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_29366.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_29366.1NoneAvailableAvailablecontig_199865 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g56130.1 +1 2e-50 172 87/99 (88%) 13101.m05931 protein CSLC1 - cellulose synthase-like family C, expressed
TAIR PP10 AT4G07960.1 +1 6e-39 140 67/99 (68%) | Symbols: ATCSLC12, CSLC12 | Cellulose-synthase-like C12 | chr4:4802628-4805114 REVERSE LENGTH=699