- Predicted Gene MLOC_29366
MLOC_29366 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_29366_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_29366_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 14.3025 | 22.3038 | 19.1561 | 19.5392 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 22.9448 | 5.91895 | 8.13789 | 11.5855 |
INF1 | Young developing inflorescences (5mm) | 11.2028 | 8.85601 | 7.64685 | 7.84119 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.82792 | 9.6841 | 8.07488 | 9.56445 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.09073 | 16.018 | 12.7745 | 16.889 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.9802 | 14.9997 | 8.33353 | 50.2643 |
CAR5 | Developing grain, bracts removed (5 DPA) | 22.9512 | 29.4505 | 26.4203 | 25.2078 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.615098 | 2.26246 | 0.691899 | 2.85764 |
CDS Structure of MLOC_29366
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_29366.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g56130.1 |
+1 |
2e-50 |
172 |
87/99 (88%) |
13101.m05931 protein CSLC1 - cellulose synthase-like family C, expressed |
TAIR PP10 |
AT4G07960.1 |
+1 |
6e-39 |
140 |
67/99 (68%) |
| Symbols: ATCSLC12, CSLC12 | Cellulose-synthase-like C12 | chr4:4802628-4805114 REVERSE LENGTH=699 |