MLOC_2935 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1233630.2991330.3338170.233465
LEAShoots from the seedlings (10 cm shoot stage)1.58653.612282.465581.89555
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.03689890.4926230.4320520.429478
NODDeveloping tillers at six leaf stage, 3rd internode0.06561910.05274130.005637860.13241
CAR5Developing grain, bracts removed (5 DPA)0.1757410.1982920.2968410.185265
CAR15Developing grain, bracts removed (15 DPA)2.355751.94812.196214.51169



CDS Structure of MLOC_2935






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2935.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2935.1CUST_10657_PI427708080AvailableAvailablecontig_126294 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g28300.1 -3 0.0 816 476/962 (49%) 13107.m02833 protein leucine rich repeat protein, putative
TAIR PP10 AT2G34930.1 -3 1e-126 410 323/902 (36%) disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905