MLOC_2934 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.67188.8004910.654811.8144
LEAShoots from the seedlings (10 cm shoot stage)16.28949.6308220.035914.5748
INF1Young developing inflorescences (5mm)1.853092.063191.854311.98767
INF2Developing inflorescences (1-1.5 cm)2.32962.965672.71723.68106
ROORoots from the seedlings (10 cm shoot stage)6.609854.456936.564177.21509
NODDeveloping tillers at six leaf stage, 3rd internode23.771524.372318.932286.94
CAR5Developing grain, bracts removed (5 DPA)35.568546.746642.837852.6673
CAR15Developing grain, bracts removed (15 DPA)32.822425.226828.142281.215



CDS Structure of MLOC_2934






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2934.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250019.1NoneNoneNoneNone
MLOC_2934.1CUST_118_PI427708080AvailableAvailablecontig_126294 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g60740.1 -3 3e-162 461 224/253 (89%) 13103.m06670 protein expressed protein
TAIR PP10 AT2G37660.1 -3 1e-145 421 209/276 (76%) NAD(P)-binding Rossmann-fold superfamily protein | chr2:15795481-15796977 REVERSE LENGTH=325