MLOC_2933 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.54049 | 3.88228 | 3.78474 | 4.12334 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.46806 | 4.20716 | 4.22928 | 3.45208 |
| INF1 | Young developing inflorescences (5mm) | 1.61516 | 1.98342 | 2.17493 | 1.7949 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.45055 | 1.35041 | 2.02587 | 1.8857 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.42405 | 9.03073 | 8.14321 | 11.3024 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.69812 | 4.65016 | 4.86026 | 14.7357 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.17075 | 2.62787 | 2.43727 | 2.7046 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.61075 | 0.47659 | 0.495808 | 1.37495 |
CDS Structure of MLOC_2933
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_2933.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g50060.2 |
+2 |
0.0 |
768 |
429/648 (66%) |
13104.m11848 protein GRAS family transcription factor domain containing protein, expressed |
| TAIR PP10 |
AT2G37650.1 |
+2 |
9e-149 |
463 |
220/379 (58%) |
GRAS family transcription factor | chr2:15792623-15794779 FORWARD LENGTH=718 |
