MLOC_29258 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3450150.2987281.268290.700532
LEAShoots from the seedlings (10 cm shoot stage)0.2447140.8314830.5012310.617262
INF1Young developing inflorescences (5mm)1.523142.348162.092541.93718
INF2Developing inflorescences (1-1.5 cm)2.630513.00053.199344.05001
ROORoots from the seedlings (10 cm shoot stage)0.3080540.3365920.4325090.674232
NODDeveloping tillers at six leaf stage, 3rd internode0.5498310.3266610.635131.35177
CAR5Developing grain, bracts removed (5 DPA)1.771241.367560.7497181.59134
CAR15Developing grain, bracts removed (15 DPA)0.9663210.6700940.3607962.33774



CDS Structure of MLOC_29258






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK356638
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356638NoneNoneNoneNone
MLOC_1746.1NoneAvailableNonecontig_1156481 (Not mapped)
MLOC_29258.1NoneAvailableAvailablecontig_1988322 (Not mapped)
MLOC_58293.1NoneAvailableNonecontig_42529 (Mapped)
MLOC_826.1NoneAvailableNonecontig_1065550 (Not mapped)
MLOC_9251.1NoneAvailableNonecontig_1505372 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----