MLOC_29180 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.368870.6085380.9776180
LEAShoots from the seedlings (10 cm shoot stage)1.167460.3786091.197370
INF1Young developing inflorescences (5mm)0.8981883.040083.457240
INF2Developing inflorescences (1-1.5 cm)3.681643.53443.171560
ROORoots from the seedlings (10 cm shoot stage)0.7473321.380652.413840
NODDeveloping tillers at six leaf stage, 3rd internode0.8317231.605262.466160
CAR5Developing grain, bracts removed (5 DPA)1.258341.133251.680550
CAR15Developing grain, bracts removed (15 DPA)0.9326520.9554270.3500120



CDS Structure of MLOC_29180






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK249789.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249789.1CUST_13946_PI427708083NoneNoneNone
MLOC_28950.1NoneAvailableNonecontig_1961744 (Not mapped)
MLOC_29180.1NoneAvailableNonecontig_198306 (Not mapped)
MLOC_30048.1NoneAvailableAvailablecontig_205984 (Mapped)
MLOC_32714.1NoneAvailableNonecontig_23140 (Not mapped)
MLOC_46139.1NoneAvailableNonecontig_286014 (Mapped)
MLOC_47528.1NoneAvailableNonecontig_307560 (Mapped)
MLOC_80321.1NoneAvailableNonecontig_897855 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----