MLOC_2918 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.053930.5152190.1529830
LEAShoots from the seedlings (10 cm shoot stage)00.1885380.1592050
INF1Young developing inflorescences (5mm)0.6258710.3113850.8711840
INF2Developing inflorescences (1-1.5 cm)0.1700280.9534720.8070520
ROORoots from the seedlings (10 cm shoot stage)1.2080.46366200
NODDeveloping tillers at six leaf stage, 3rd internode00.3463820.1178160
CAR5Developing grain, bracts removed (5 DPA)1.16850.5814851.018370
CAR15Developing grain, bracts removed (15 DPA)0.1997580.1069790.2995380



CDS Structure of MLOC_2918






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252987.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252987.1CUST_19220_PI427708080NoneNoneNone
MLOC_2918.1NoneAvailableNonecontig_126150 (Mapped)
MLOC_41485.1NoneAvailableNonecontig_2590664 (Not mapped)
MLOC_5853.2NoneAvailableAvailablecontig_136790 (Mapped)
MLOC_78928.1NoneAvailableNonecontig_82534 (Mapped)
MLOC_9607.1NoneAvailableNonecontig_153818 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----