- Predicted Gene MLOC_29166
MLOC_29166 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.363737 | 0.723797 | 0.416165 | 0.593707 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.808602 | 1.48196 | 1.55877 | 1.17861 |
| INF1 | Young developing inflorescences (5mm) | 1.73653 | 2.10304 | 2.04322 | 1.67311 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.04094 | 3.62625 | 3.3329 | 4.13632 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.314143 | 0.624151 | 0.723554 | 0.82108 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.400939 | 0.959331 | 1.27814 | 3.79275 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.601081 | 0.861134 | 0.653851 | 0.725312 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.511988 | 0.665719 | 0.721827 | 1.40622 |
CDS Structure of MLOC_29166
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_29166.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g33940.1 |
-3 |
3e-138 |
425 |
265/636 (42%) |
13109.m03398 protein expressed protein |
| TAIR PP10 |
AT1G05950.1 |
-3 |
6e-41 |
159 |
149/614 (24%) |
unknown protein; Has 50 Blast hits to 45 proteins in 14 species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr1:1804573-1807471 REVERSE LENGTH=627 |