MLOC_29160 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.9997514.349211.72940
LEAShoots from the seedlings (10 cm shoot stage)19.417916.65849.297820
INF1Young developing inflorescences (5mm)28.057524.376528.28660
INF2Developing inflorescences (1-1.5 cm)28.914621.595918.20290
ROORoots from the seedlings (10 cm shoot stage)9.9470214.49219.064030
NODDeveloping tillers at six leaf stage, 3rd internode4.912711.699246.134220
CAR5Developing grain, bracts removed (5 DPA)10.747116.598115.69130
CAR15Developing grain, bracts removed (15 DPA)7.731384.838448.464230



CDS Structure of MLOC_29160






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361745
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361745CUST_20419_PI427708080NoneNoneNone
MLOC_27773.1NoneAvailableAvailablecontig_186163 (Mapped)
MLOC_29160.1NoneAvailableNonecontig_1980514 (Not mapped)
MLOC_46578.2NoneAvailableNonecontig_292511 (Not mapped)
MLOC_48688.2NoneAvailableNonecontig_328031 (Mapped)
MLOC_69437.1NoneAvailableNonecontig_56423 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----