MLOC_29143 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2228551.178340.6136511.12395
LEAShoots from the seedlings (10 cm shoot stage)0.3658170.3644540.8997040.943763
INF1Young developing inflorescences (5mm)0.8114222.019920.8909081.92222
INF2Developing inflorescences (1-1.5 cm)1.064690.4463671.253132.01825
ROORoots from the seedlings (10 cm shoot stage)0.3666880.312921.051470.973171
NODDeveloping tillers at six leaf stage, 3rd internode0.6387331.053151.384296.13005
CAR5Developing grain, bracts removed (5 DPA)0.308160.7313270.338730.85696
CAR15Developing grain, bracts removed (15 DPA)0.2166230.22250200.68209



CDS Structure of MLOC_29143






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_29143.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_29143.1CUST_11975_PI427708083AvailableAvailablecontig_197876 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g02620.1 +1 4e-50 171 79/96 (82%) 13102.m00207 protein sialyltransferase family domain containing protein, expressed
TAIR PP10 AT3G48820.2 +1 1e-44 156 68/96 (71%) Glycosyltransferase family 29 (sialyltransferase) family protein | chr3:18100106-18102852 REVERSE LENGTH=431