- Predicted Gene MLOC_29143
MLOC_29143 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.222855 | 1.17834 | 0.613651 | 1.12395 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.365817 | 0.364454 | 0.899704 | 0.943763 |
INF1 | Young developing inflorescences (5mm) | 0.811422 | 2.01992 | 0.890908 | 1.92222 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.06469 | 0.446367 | 1.25313 | 2.01825 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.366688 | 0.31292 | 1.05147 | 0.973171 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.638733 | 1.05315 | 1.38429 | 6.13005 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.30816 | 0.731327 | 0.33873 | 0.85696 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.216623 | 0.222502 | 0 | 0.68209 |
CDS Structure of MLOC_29143
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_29143.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g02620.1 |
+1 |
4e-50 |
171 |
79/96 (82%) |
13102.m00207 protein sialyltransferase family domain containing protein, expressed |
TAIR PP10 |
AT3G48820.2 |
+1 |
1e-44 |
156 |
68/96 (71%) |
Glycosyltransferase family 29 (sialyltransferase) family protein | chr3:18100106-18102852 REVERSE LENGTH=431 |