MLOC_29125 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.318130.269681.271980
LEAShoots from the seedlings (10 cm shoot stage)01.521621.68890
INF1Young developing inflorescences (5mm)1.419543.396122.128020
INF2Developing inflorescences (1-1.5 cm)2.69652.453442.746840
ROORoots from the seedlings (10 cm shoot stage)1.05431.15151.928850
NODDeveloping tillers at six leaf stage, 3rd internode0.2585250.9258112.98170
CAR5Developing grain, bracts removed (5 DPA)3.404182.526893.120580
CAR15Developing grain, bracts removed (15 DPA)1.8158700.9030270



CDS Structure of MLOC_29125






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366021
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366021CUST_21212_PI427708080NoneNoneNone
MLOC_2359.1NoneAvailableNonecontig_120980 (Mapped)
MLOC_29125.1NoneAvailableNonecontig_1976785 (Not mapped)
MLOC_31738.6NoneAvailableNonecontig_221830 (Mapped)
MLOC_43304.1NoneAvailableAvailablecontig_269323 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----