MLOC_29122 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.951610.8364721.690991.89994
LEAShoots from the seedlings (10 cm shoot stage)2.810271.262221.505531.97854
INF1Young developing inflorescences (5mm)2.458184.275124.686795.03475
INF2Developing inflorescences (1-1.5 cm)4.883785.728994.777088.81025
ROORoots from the seedlings (10 cm shoot stage)2.173392.222654.584154.19375
NODDeveloping tillers at six leaf stage, 3rd internode1.708391.283286.2673312.3946
CAR5Developing grain, bracts removed (5 DPA)4.283512.131193.272944.95127
CAR15Developing grain, bracts removed (15 DPA)1.972072.104972.452997.47794



CDS Structure of MLOC_29122






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_29122.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_29122.1CUST_4164_PI427708083AvailableAvailablecontig_1976555 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g43080.1 +1 3e-15 71 32/41 (78%) 13101.m04442 protein exonuclease, putative, expressed
TAIR PP10None-----