- Predicted Gene MLOC_29110
MLOC_29110 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_29110_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_29110_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 60.5619 | 87.0655 | 81.5453 | 78.1718 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 69.439 | 34.4044 | 30.02 | 37.8436 |
INF1 | Young developing inflorescences (5mm) | 77.6393 | 75.2412 | 66.5909 | 61.1463 |
INF2 | Developing inflorescences (1-1.5 cm) | 58.839 | 67.228 | 57.7696 | 65.9666 |
ROO | Roots from the seedlings (10 cm shoot stage) | 62.5525 | 88.4022 | 65.8374 | 94.0087 |
NOD | Developing tillers at six leaf stage, 3rd internode | 76.6987 | 67.4873 | 42.1191 | 187.786 |
CAR5 | Developing grain, bracts removed (5 DPA) | 140.282 | 118.333 | 125.662 | 118.916 |
CAR15 | Developing grain, bracts removed (15 DPA) | 45.2501 | 42.7481 | 38.314 | 96.4451 |
CDS Structure of MLOC_29110
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_29110.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g04110.2 |
+2 |
0.0 |
2206 |
1091/1219 (89%) |
13109.m00335 protein coatomer alpha subunit, putative, expressed |
TAIR PP10 |
AT1G62020.1 |
+2 |
0.0 |
1946 |
944/1225 (77%) |
Coatomer, alpha subunit | chr1:22919814-22923728 FORWARD LENGTH=1216 |