MLOC_29047 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.086223.913826.36320
LEAShoots from the seedlings (10 cm shoot stage)13.289320.245823.03310
INF1Young developing inflorescences (5mm)28.743730.020433.30160
INF2Developing inflorescences (1-1.5 cm)42.425640.904931.13250
ROORoots from the seedlings (10 cm shoot stage)1.9999912.43445.371940
NODDeveloping tillers at six leaf stage, 3rd internode19.851924.426327.64270
CAR5Developing grain, bracts removed (5 DPA)22.599828.768422.78280
CAR15Developing grain, bracts removed (15 DPA)12.413913.41195.671930



CDS Structure of MLOC_29047






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249301.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249301.1CUST_23254_PI427708080NoneNoneNone
MLOC_13145.1NoneAvailableNonecontig_156493 (Mapped)
MLOC_1912.1NoneAvailableNonecontig_1170319 (Not mapped)
MLOC_2544.1NoneAvailableNonecontig_1226734 (Not mapped)
MLOC_2887.1NoneAvailableNonecontig_1257715 (Not mapped)
MLOC_29047.1NoneAvailableNonecontig_1969596 (Not mapped)
MLOC_30776.1NoneAvailableNonecontig_21252 (Not mapped)
MLOC_33489.1NoneAvailableNonecontig_237800 (Not mapped)
MLOC_35846.1NoneAvailableNonecontig_252373 (Mapped)
MLOC_41311.1NoneAvailableNonecontig_2582226 (Not mapped)
MLOC_42452.1NoneAvailableNonecontig_2645397 (Not mapped)
MLOC_46466.1NoneAvailableNonecontig_290832 (Mapped)
MLOC_47434.1NoneAvailableNonecontig_306050 (Mapped)
MLOC_48547.1NoneAvailableAvailablecontig_325745 (Not mapped)
MLOC_59622.1NoneAvailableNonecontig_437690 (Mapped)
MLOC_80103.1NoneAvailableNonecontig_886570 (Not mapped)
MLOC_955.1NoneAvailableNonecontig_1079535 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----