- Predicted Gene MLOC_29022
MLOC_29022 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 15.3439 | 19.2546 | 14.1992 | 12.558 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 22.5606 | 24.1783 | 16.2772 | 13.4668 |
INF1 | Young developing inflorescences (5mm) | 34.3333 | 36.9915 | 56.3725 | 24.7839 |
INF2 | Developing inflorescences (1-1.5 cm) | 49.5615 | 49.0517 | 77.3827 | 48.6055 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.6753 | 29.1483 | 26.6984 | 21.6501 |
NOD | Developing tillers at six leaf stage, 3rd internode | 33.6645 | 20.6613 | 22.5761 | 53.8527 |
CAR5 | Developing grain, bracts removed (5 DPA) | 40.1188 | 33.6392 | 41.3927 | 28.5115 |
CAR15 | Developing grain, bracts removed (15 DPA) | 15.4908 | 13.6566 | 21.1444 | 26.4278 |
CDS Structure of MLOC_29022
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_29022.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g39960.1 |
+3 |
1e-16 |
55 |
26/32 (81%) |
13105.m04213 protein 40S ribosomal protein S26, putative, expressed |
TAIR PP10 |
AT2G40510.1 |
+3 |
6e-12 |
47 |
22/32 (69%) |
Ribosomal protein S26e family protein | chr2:16918506-16919623 FORWARD LENGTH=133 |