MLOC_29002 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.674981.689411.368690.916614
LEAShoots from the seedlings (10 cm shoot stage)0.9782311.267781.008730.678538
INF1Young developing inflorescences (5mm)1.738392.106792.458281.19755
INF2Developing inflorescences (1-1.5 cm)4.727744.040393.472493.38338
ROORoots from the seedlings (10 cm shoot stage)0.3286791.038711.240660.813293
NODDeveloping tillers at six leaf stage, 3rd internode0.4119530.6878321.031341.8011
CAR5Developing grain, bracts removed (5 DPA)3.419762.520673.642082.16985
CAR15Developing grain, bracts removed (15 DPA)6.467264.138124.474118.73577



CDS Structure of MLOC_29002






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK366750
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366750CUST_14239_PI427708083NoneNoneNone
MLOC_2745.1NoneAvailableNonecontig_12451 (Not mapped)
MLOC_29002.1NoneAvailableAvailablecontig_196560 (Mapped)
MLOC_33446.1NoneAvailableNonecontig_2374349 (Not mapped)
MLOC_35889.1NoneAvailableNonecontig_252519 (Mapped)
MLOC_42324.1NoneAvailableNonecontig_2637264 (Not mapped)
MLOC_47875.1NoneAvailableNonecontig_313794 (Not mapped)
MLOC_47897.1NoneAvailableNonecontig_31412 (Not mapped)
MLOC_48982.1NoneAvailableNonecontig_333254 (Not mapped)
MLOC_56476.1NoneAvailableNonecontig_40871 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----