MLOC_28979 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.94079601.151530
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)7.849124.958573.311390
INF2Developing inflorescences (1-1.5 cm)3.2963300.8245210
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode5.516770.617160.5140340
CAR5Developing grain, bracts removed (5 DPA)02.1356900
CAR15Developing grain, bracts removed (15 DPA)0.557784000



CDS Structure of MLOC_28979






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367368
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367368CUST_25121_PI427708080NoneNoneNone
MLOC_28979.1NoneAvailableNonecontig_1964078 (Not mapped)
MLOC_35840.1NoneAvailableNonecontig_2523496 (Not mapped)
MLOC_41850.1NoneAvailableNonecontig_2609705 (Not mapped)
MLOC_49908.1NoneAvailableNonecontig_35080 (Not mapped)
MLOC_71040.1NoneAvailableAvailablecontig_590263 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----