MLOC_28950 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.712246.138574.150850
LEAShoots from the seedlings (10 cm shoot stage)4.229627.873865.305280
INF1Young developing inflorescences (5mm)14.510618.370812.53840
INF2Developing inflorescences (1-1.5 cm)15.339713.936910.50220
ROORoots from the seedlings (10 cm shoot stage)3.679966.911674.016540
NODDeveloping tillers at six leaf stage, 3rd internode1.386552.401936.088470
CAR5Developing grain, bracts removed (5 DPA)8.396288.846759.99160
CAR15Developing grain, bracts removed (15 DPA)2.831352.102532.431470



CDS Structure of MLOC_28950






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK249789.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249789.1CUST_13946_PI427708083NoneNoneNone
MLOC_28950.1NoneAvailableNonecontig_1961744 (Not mapped)
MLOC_29180.1NoneAvailableNonecontig_198306 (Not mapped)
MLOC_30048.1NoneAvailableAvailablecontig_205984 (Mapped)
MLOC_32714.1NoneAvailableNonecontig_23140 (Not mapped)
MLOC_46139.1NoneAvailableNonecontig_286014 (Mapped)
MLOC_47528.1NoneAvailableNonecontig_307560 (Mapped)
MLOC_80321.1NoneAvailableNonecontig_897855 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----