MLOC_28948 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.63948.1667510.16030
LEAShoots from the seedlings (10 cm shoot stage)12.377710.769910.03250
INF1Young developing inflorescences (5mm)7.9045410.396514.36540
INF2Developing inflorescences (1-1.5 cm)17.767119.470524.50430
ROORoots from the seedlings (10 cm shoot stage)9.655326.426410.16510
NODDeveloping tillers at six leaf stage, 3rd internode13.216720.372524.4090
CAR5Developing grain, bracts removed (5 DPA)18.509317.744215.95290
CAR15Developing grain, bracts removed (15 DPA)6.026483.814026.446020



CDS Structure of MLOC_28948






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364479
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364479CUST_20915_PI427708080NoneNoneNone
MLOC_28948.1NoneAvailableNonecontig_1961562 (Not mapped)
MLOC_32479.1NoneAvailableNonecontig_228951 (Mapped)
MLOC_46923.1NoneAvailableNonecontig_297807 (Not mapped)
MLOC_52961.1NoneAvailableAvailablecontig_379365 (Mapped)
MLOC_7249.1NoneAvailableNonecontig_1388630 (Not mapped)
MLOC_79775.1NoneAvailableNonecontig_86906 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----