MLOC_28883 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.25190100.2164130.195861
LEAShoots from the seedlings (10 cm shoot stage)0.63777700.1247480.299929
INF1Young developing inflorescences (5mm)0.6953380.07237170.5937070.378631
INF2Developing inflorescences (1-1.5 cm)1.825051.446681.549241.63146
ROORoots from the seedlings (10 cm shoot stage)00.16895900.540978
NODDeveloping tillers at six leaf stage, 3rd internode0.1702270.3179290.4451461.06298
CAR5Developing grain, bracts removed (5 DPA)0.0851640.154250.4380660.1995
CAR15Developing grain, bracts removed (15 DPA)0.6727461.034551.851382.17743



CDS Structure of MLOC_28883






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28883.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_28883.1CUST_4131_PI427708083AvailableAvailablecontig_1956648 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g13130.1 +3 3e-11 64 31/52 (60%) 13102.m01454 protein KH domain-containing protein, putative, expressed
TAIR PP10None-----