MLOC_28868 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.436191.975011.538972.091
LEAShoots from the seedlings (10 cm shoot stage)2.366962.054281.88921.8608
INF1Young developing inflorescences (5mm)0.9050080.7040050.8588110.788348
INF2Developing inflorescences (1-1.5 cm)2.512561.655712.494782.67147
ROORoots from the seedlings (10 cm shoot stage)5.890944.397352.314465.36771
NODDeveloping tillers at six leaf stage, 3rd internode1.916062.601762.865239.04977
CAR5Developing grain, bracts removed (5 DPA)2.870422.778572.746653.10738
CAR15Developing grain, bracts removed (15 DPA)0.4431520.4479140.6786371.35673



CDS Structure of MLOC_28868






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28868.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373667NoneNoneNoneNone
MLOC_28868.3CUST_2091_PI427708080AvailableAvailablecontig_195484 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g06570.1 -2 2e-143 417 216/292 (74%) 13107.m00625 protein receptor protein kinase CRINKLY4 precursor, putative, expressed
TAIR PP10 AT5G22050.2 -2 4e-71 230 139/304 (46%) Protein kinase superfamily protein | chr5:7301467-7303209 FORWARD LENGTH=307