- Predicted Gene MLOC_28859
MLOC_28859 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_28859_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_28859_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0845893 | 0.0994921 | 0.159377 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.14315 | 0.0658136 | 0.091091 | 0.146661 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.175539 | 0.0930577 | 0 | 0.236381 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0695714 | 0 | 0.0506023 | 0.0694447 |
CAR5 | Developing grain, bracts removed (5 DPA) | 331.364 | 336.607 | 292.121 | 333.777 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.07769 | 1.89833 | 2.99482 | 4.53046 |
CDS Structure of MLOC_28859
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28859.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g15710.1 |
+1 |
4e-44 |
147 |
76/125 (61%) |
13102.m01752 protein plastocyanin-like domain containing protein, putative |
TAIR PP10 |
AT2G02850.1 |
+1 |
2e-30 |
111 |
50/99 (51%) |
| Symbols: ARPN | plantacyanin | chr2:826630-827720 REVERSE LENGTH=129 |