MLOC_28841 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7022231.304810.5321730.984483
LEAShoots from the seedlings (10 cm shoot stage)1.246131.560781.945431.32358
INF1Young developing inflorescences (5mm)4.543133.759353.61033.43869
INF2Developing inflorescences (1-1.5 cm)4.949555.107364.175085.68638
ROORoots from the seedlings (10 cm shoot stage)1.224371.417460.7427251.71361
NODDeveloping tillers at six leaf stage, 3rd internode0.4024491.409542.84965.06561
CAR5Developing grain, bracts removed (5 DPA)1.864842.194972.425332.24195
CAR15Developing grain, bracts removed (15 DPA)0.331960.9357810.8105721.60727



CDS Structure of MLOC_28841






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28841.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_28841.3CUST_11966_PI427708083AvailableAvailablecontig_195136 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g31514.3 +1 4e-25 100 47/70 (67%) 13109.m03163 protein dihydroflavonol-4-reductase, putative, expressed
TAIR PP10 AT2G33590.1 +1 4e-17 77 35/69 (51%) NAD(P)-binding Rossmann-fold superfamily protein | chr2:14224622-14226365 FORWARD LENGTH=321