- Predicted Gene MLOC_28802
MLOC_28802 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_28802_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_28802_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 10.7106 | 8.05774 | 7.19963 | 11.9778 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.83213 | 8.97791 | 12.3083 | 12.4816 |
INF1 | Young developing inflorescences (5mm) | 6.95298 | 6.74338 | 7.58147 | 8.29446 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.6535 | 12.0676 | 11.8319 | 16.6235 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.6518 | 11.6422 | 10.3464 | 19.4133 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.4321 | 21.3303 | 22.1159 | 92.1944 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.98 | 13.0595 | 11.2498 | 15.129 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.9173 | 4.69965 | 3.82575 | 15.3452 |
CDS Structure of MLOC_28802
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28802.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g38300.2 |
-2 |
3e-40 |
141 |
73/86 (85%) |
13102.m04213 protein SNF7 domain containing protein, putative, expressed |
TAIR PP10 |
AT5G09260.1 |
-2 |
8e-17 |
77 |
40/85 (47%) |
| Symbols: VPS20.2 | vacuolar protein sorting-associated protein 20.2 | chr5:2876797-2878355 FORWARD LENGTH=216 |