MLOC_28801 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.63858501.58861
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.94135501.225250.799131
INF2Developing inflorescences (1-1.5 cm)0.485655000.601516
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.4200090.6328442.391323.48455
CAR5Developing grain, bracts removed (5 DPA)1.233841.108980.5720051.41409
CAR15Developing grain, bracts removed (15 DPA)0000.515373



CDS Structure of MLOC_28801






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28801.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_28801.1CUST_4119_PI427708083AvailableAvailablecontig_194848 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g53950.1 +3 4e-21 86 40/49 (82%) 13103.m05908 protein strictosidine synthase, putative, expressed
TAIR PP10None-----