MLOC_28725 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.879364.016117.691520
LEAShoots from the seedlings (10 cm shoot stage)7.371722.865694.672090
INF1Young developing inflorescences (5mm)6.595762.550672.473510
INF2Developing inflorescences (1-1.5 cm)3.638863.339852.654410
ROORoots from the seedlings (10 cm shoot stage)01.0628100
NODDeveloping tillers at six leaf stage, 3rd internode18.709825.229419.46040
CAR5Developing grain, bracts removed (5 DPA)7.828515.053725.035250
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_28725






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK360340
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360340CUST_20203_PI427708080NoneNoneNone
MLOC_28725.1NoneAvailableNonecontig_194364 (Not mapped)
MLOC_37738.1NoneAvailableAvailablecontig_2548987 (Mapped)
MLOC_41941.1NoneAvailableNonecontig_261486 (Mapped)
MLOC_48435.1NoneAvailableNonecontig_323706 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----