MLOC_2870 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.707216.477.287456.31662
LEAShoots from the seedlings (10 cm shoot stage)8.4499911.728618.17979.69093
INF1Young developing inflorescences (5mm)6.265817.3101413.9615.87933
INF2Developing inflorescences (1-1.5 cm)8.654777.646510.52518.19344
ROORoots from the seedlings (10 cm shoot stage)21.226814.657920.083218.6443
NODDeveloping tillers at six leaf stage, 3rd internode14.53597.0753914.89425.7535
CAR5Developing grain, bracts removed (5 DPA)2.37041.363241.794331.62767
CAR15Developing grain, bracts removed (15 DPA)2.874122.108153.183815.20222



CDS Structure of MLOC_2870






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2870.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_2870.1CUST_11958_PI427708083AvailableAvailablecontig_125576 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g09220.5 -3 2e-90 286 138/178 (78%) 13103.m01067 protein stage II sporulation protein E, putative, expressed
TAIR PP10 AT4G33500.1 -3 2e-45 169 83/173 (48%) Protein phosphatase 2C family protein | chr4:16112835-16116243 REVERSE LENGTH=724