MLOC_28679 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.3668460.7917210
LEAShoots from the seedlings (10 cm shoot stage)2.168512.338212.331520
INF1Young developing inflorescences (5mm)1.629251.3922100
INF2Developing inflorescences (1-1.5 cm)1.998551.865351.270550
ROORoots from the seedlings (10 cm shoot stage)0.3569810.3792140.5535210
NODDeveloping tillers at six leaf stage, 3rd internode0.5876861.643582.148540
CAR5Developing grain, bracts removed (5 DPA)0.8257170.7566892.483180
CAR15Developing grain, bracts removed (15 DPA)1.538210.915031.268180



CDS Structure of MLOC_28679






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372888
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372888CUST_25690_PI427708080NoneNoneNone
MLOC_26034.1NoneAvailableNonecontig_1730607 (Not mapped)
MLOC_28679.1NoneAvailableNonecontig_1939443 (Not mapped)
MLOC_31155.2NoneAvailableNonecontig_216211 (Not mapped)
MLOC_41251.1NoneAvailableNonecontig_2579769 (Not mapped)
MLOC_41929.1NoneAvailableNonecontig_2614402 (Not mapped)
MLOC_46585.1NoneAvailableAvailablecontig_292639 (Not mapped)
MLOC_46605.1NoneAvailableNonecontig_292871 (Not mapped)
MLOC_64049.1NoneAvailableNonecontig_48305 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----