MLOC_28666 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.163520.8048821.563710.922796
LEAShoots from the seedlings (10 cm shoot stage)0.6894631.500051.02720.765173
INF1Young developing inflorescences (5mm)0.1048770.1648060.1880490.110282
INF2Developing inflorescences (1-1.5 cm)0.088464100.05647840.101271
ROORoots from the seedlings (10 cm shoot stage)1.618031.22281.431631.27446
NODDeveloping tillers at six leaf stage, 3rd internode0.6815390.3293290.6006981.0303
CAR5Developing grain, bracts removed (5 DPA)0.05433960.1996130.05727850.0991052
CAR15Developing grain, bracts removed (15 DPA)000.0726130.0864754



CDS Structure of MLOC_28666






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28666.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_28666.1CUST_11956_PI427708083AvailableAvailablecontig_1938697 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g05070.1 +3 2e-22 99 67/116 (58%) 13106.m00477 protein protein kinase domain containing protein, expressed
TAIR PP10 AT5G20050.1 +3 1e-16 82 39/61 (64%) Protein kinase superfamily protein | chr5:6774381-6775739 FORWARD LENGTH=452