MLOC_28654 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.152021.22542.034820
LEAShoots from the seedlings (10 cm shoot stage)6.460896.659055.64080
INF1Young developing inflorescences (5mm)1.411951.318192.03260
INF2Developing inflorescences (1-1.5 cm)2.398671.488521.639690
ROORoots from the seedlings (10 cm shoot stage)00.88466100
NODDeveloping tillers at six leaf stage, 3rd internode1.721371.703811.572810
CAR5Developing grain, bracts removed (5 DPA)2.38422.907411.42870
CAR15Developing grain, bracts removed (15 DPA)2.177681.180581.884190



CDS Structure of MLOC_28654






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK359692
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359692CUST_20119_PI427708080NoneNoneNone
MLOC_28514.2NoneAvailableNonecontig_192575 (Not mapped)
MLOC_28654.1NoneAvailableNonecontig_193744 (Not mapped)
MLOC_60320.1NoneAvailableNonecontig_442787 (Mapped)
MLOC_62113.1NoneAvailableAvailablecontig_46209 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----