MLOC_28641 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.25892900.889386
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.5166530.3144470.473659
INF2Developing inflorescences (1-1.5 cm)00.57654300.803461
ROORoots from the seedlings (10 cm shoot stage)0000.194283
NODDeveloping tillers at six leaf stage, 3rd internode0000.0150778
CAR5Developing grain, bracts removed (5 DPA)0.2668020.2430140.2851410.381153
CAR15Developing grain, bracts removed (15 DPA)1.245720.5197990.7504383.10212



CDS Structure of MLOC_28641






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28641.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_28641.1CUST_4105_PI427708083AvailableAvailablecontig_1936490 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g01780.1 -3 2e-15 73 35/75 (47%) 13109.m00093 protein transposon protein, putative, unclassified
TAIR PP10None-----