- Predicted Gene MLOC_28615
MLOC_28615 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.89056 | 1.93205 | 1.93078 | 2.07485 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.28009 | 0.367658 | 0.182991 | 0.54483 |
| INF1 | Young developing inflorescences (5mm) | 4.2362 | 4.39575 | 4.48685 | 4.21434 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.81001 | 3.30984 | 4.57076 | 4.68567 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.37414 | 0.350686 | 1.09685 | 0.686424 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0677635 | 0.0938806 | 0.404039 | 0.483583 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.666064 | 1.06503 | 0.848785 | 1.01341 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0721627 | 0 | 0 | 0.258627 |
CDS Structure of MLOC_28615
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28615.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g17100.1 |
-1 |
1e-19 |
84 |
40/44 (91%) |
13103.m02043 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
| TAIR PP10 |
AT5G02560.1 |
-1 |
2e-18 |
79 |
37/43 (86%) |
| Symbols: HTA12 | histone H2A 12 | chr5:575437-576456 FORWARD LENGTH=153 |