MLOC_28605 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.776343.005433.044241.74302
LEAShoots from the seedlings (10 cm shoot stage)4.101783.290311.868141.97789
INF1Young developing inflorescences (5mm)1.087512.479943.269111.08137
INF2Developing inflorescences (1-1.5 cm)2.119611.856462.627261.67425
ROORoots from the seedlings (10 cm shoot stage)02.787612.674422.59572
NODDeveloping tillers at six leaf stage, 3rd internode3.367125.763925.6895514.49
CAR5Developing grain, bracts removed (5 DPA)1.132442.256462.034641.17939
CAR15Developing grain, bracts removed (15 DPA)1.994561.474031.586882.70117



CDS Structure of MLOC_28605






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK251744.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251744.1NoneNoneNoneNone
MLOC_25032.1NoneAvailableNonecontig_1666971 (Mapped)
MLOC_28605.1NoneAvailableAvailablecontig_193313 (Mapped)
MLOC_29262.1NoneAvailableNonecontig_1988726 (Not mapped)
MLOC_32466.1NoneAvailableNonecontig_228820 (Mapped)
MLOC_46632.4NoneAvailableNonecontig_293459 (Mapped)
MLOC_49420.1NoneAvailableNonecontig_341308 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----