MLOC_28516 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.149913.26512.1490
LEAShoots from the seedlings (10 cm shoot stage)10.37971.793773.551490
INF1Young developing inflorescences (5mm)4.57172.82052.508620
INF2Developing inflorescences (1-1.5 cm)4.794434.480484.843940
ROORoots from the seedlings (10 cm shoot stage)4.805248.086733.967090
NODDeveloping tillers at six leaf stage, 3rd internode9.759938.262383.805120
CAR5Developing grain, bracts removed (5 DPA)31.539131.075627.98930
CAR15Developing grain, bracts removed (15 DPA)1.017941.082821.412230



CDS Structure of MLOC_28516






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250051.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250051.1CUST_18785_PI427708080NoneNoneNone
MLOC_165.1NoneAvailableAvailablecontig_101076 (Mapped)
MLOC_25021.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_28516.2NoneAvailableNonecontig_192579 (Not mapped)
MLOC_32658.1NoneAvailableNonecontig_23072 (Not mapped)
MLOC_48661.2NoneAvailableNonecontig_327541 (Mapped)
MLOC_8314.1NoneAvailableNonecontig_141984 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----