MLOC_28471 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.268554.749352.305180
LEAShoots from the seedlings (10 cm shoot stage)10.461804.139570
INF1Young developing inflorescences (5mm)5.514594.41513.22740
INF2Developing inflorescences (1-1.5 cm)5.526427.4785.567390
ROORoots from the seedlings (10 cm shoot stage)05.0846900
NODDeveloping tillers at six leaf stage, 3rd internode2.436970.4773122.04470
CAR5Developing grain, bracts removed (5 DPA)5.426385.543277.278120
CAR15Developing grain, bracts removed (15 DPA)0.721927000



CDS Structure of MLOC_28471






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365134
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365134CUST_24862_PI427708080NoneNoneNone
MLOC_28471.1NoneAvailableNonecontig_192177 (Mapped)
MLOC_35190.1NoneAvailableAvailablecontig_246308 (Not mapped)
MLOC_50097.2NoneAvailableNonecontig_354408 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----