MLOC_2842 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.648622.595622.797819.4409
LEAShoots from the seedlings (10 cm shoot stage)25.590224.817122.387119.7314
INF1Young developing inflorescences (5mm)21.54224.559725.341318.6256
INF2Developing inflorescences (1-1.5 cm)25.782727.563227.599827.2611
ROORoots from the seedlings (10 cm shoot stage)26.099329.705628.336332.3768
NODDeveloping tillers at six leaf stage, 3rd internode22.168824.20419.927971.8648
CAR5Developing grain, bracts removed (5 DPA)29.441629.663131.124926.5719
CAR15Developing grain, bracts removed (15 DPA)31.793727.691331.751864.04



CDS Structure of MLOC_2842






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_2842.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376233NoneNoneNoneNone
MLOC_2842.1CUST_111_PI427708080AvailableAvailablecontig_125279 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g49500.2 -1 0.0 1053 576/637 (90%) 13103.m05367 protein ethylene receptor, putative, expressed
TAIR PP10 AT1G66340.1 -1 0.0 823 449/600 (75%) | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduction histidine kinase, hybrid-type, ethylene sensor | chr1:24734698-24737366 FORWARD LENGTH=738