- Predicted Gene MLOC_28414
MLOC_28414 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_28414_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_28414_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.62434 | 3.65354 | 2.83719 | 2.47725 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.071 | 1.19919 | 1.3861 | 1.28091 |
INF1 | Young developing inflorescences (5mm) | 5.81887 | 5.39227 | 5.42018 | 4.04754 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.57702 | 4.10541 | 3.42134 | 4.06039 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.855961 | 1.60787 | 0.746075 | 1.43002 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.395146 | 0.640391 | 1.18969 | 2.37587 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.99292 | 1.72617 | 2.11199 | 1.72633 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.763018 | 0.516845 | 0.139059 | 1.09781 |
CDS Structure of MLOC_28414
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28414.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g12780.1 |
-1 |
2e-31 |
131 |
60/64 (94%) |
13106.m01404 protein OsDegp10 - Putative Deg protease homologue, expressed |
TAIR PP10 |
AT5G40200.1 |
-1 |
5e-27 |
116 |
54/64 (84%) |
| Symbols: DegP9 | DegP protease 9 | chr5:16070402-16073101 FORWARD LENGTH=592 |