MLOC_28408 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.227066.693167.870835.27282
LEAShoots from the seedlings (10 cm shoot stage)7.172622.598873.436083.27587
INF1Young developing inflorescences (5mm)14.034317.95122.135310.1397
INF2Developing inflorescences (1-1.5 cm)15.702221.471316.381414.6428
ROORoots from the seedlings (10 cm shoot stage)1.778044.825976.753593.95064
NODDeveloping tillers at six leaf stage, 3rd internode9.753319.4747.5176525.1984
CAR5Developing grain, bracts removed (5 DPA)8.9550511.732911.40477.33633
CAR15Developing grain, bracts removed (15 DPA)5.266253.727813.682337.77309



CDS Structure of MLOC_28408






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_28408.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_28408.2CUST_11950_PI427708083AvailableAvailablecontig_1915326 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g31460.1 -3 6e-13 69 33/44 (75%) 13108.m03262 protein GTPase of unknown function domain containing protein, putative, expressed
TAIR PP10None-----