- Predicted Gene MLOC_28407
MLOC_28407 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_28407_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_28407_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.0284935 | 0.100809 | 0.141888 | 0.0966026 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.251069 | 0.327938 | 0.129586 | 0.194039 |
INF1 | Young developing inflorescences (5mm) | 0.130346 | 0.215396 | 0.163703 | 0.150173 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.208664 | 0.277578 | 0.372085 | 0.304599 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.0522528 | 0.235187 | 0.226949 | 0.247316 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0379319 | 0.0997304 | 0.0217762 | 0.248108 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.490437 | 0.168948 | 0.289683 | 0.303522 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.548131 | 0.337557 | 0.572492 | 1.13553 |
CDS Structure of MLOC_28407
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28407.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g02490.1 |
-1 |
8e-89 |
177 |
105/296 (35%) |
13107.m00173 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |