- Predicted Gene MLOC_28404
MLOC_28404 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_28404_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_28404_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.526216 | 3.10497 | 2.01781 | 1.77961 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.62587 | 3.75977 | 1.86719 | 2.17837 |
INF1 | Young developing inflorescences (5mm) | 6.17579 | 7.04304 | 8.31184 | 5.88731 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.6589 | 9.90435 | 12.4147 | 12.4701 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.608823 | 1.69898 | 1.57454 | 1.46856 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.04945 | 2.01877 | 3.38455 | 5.15627 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.39128 | 9.53855 | 8.24088 | 7.1652 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.58963 | 2.81751 | 3.81616 | 7.55505 |
CDS Structure of MLOC_28404
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_28404.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g51790.2 |
-1 |
3e-105 |
334 |
176/266 (66%) |
13105.m05601 protein RecF/RecN/SMC N terminal domain containing protein, expressed |
TAIR PP10 |
AT5G15920.1 |
-1 |
4e-81 |
267 |
141/264 (53%) |
| Symbols: SMC5 | structural maintenance of chromosomes 5 | chr5:5196210-5199559 FORWARD LENGTH=1053 |