MLOC_28402 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains02.252550.8731060
LEAShoots from the seedlings (10 cm shoot stage)4.627652.758452.108690
INF1Young developing inflorescences (5mm)1.418971.288011.20210
INF2Developing inflorescences (1-1.5 cm)3.72812.65221.941680
ROORoots from the seedlings (10 cm shoot stage)00.5273251.603510
NODDeveloping tillers at six leaf stage, 3rd internode1.074060.7780272.730050
CAR5Developing grain, bracts removed (5 DPA)1.771722.260491.692170
CAR15Developing grain, bracts removed (15 DPA)0.5208930.3023790.3785960



CDS Structure of MLOC_28402






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK361609
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361609CUST_14133_PI427708083NoneNoneNone
MLOC_28402.1NoneAvailableNonecontig_1914933 (Not mapped)
MLOC_31622.1NoneAvailableNonecontig_2206250 (Not mapped)
MLOC_47863.1NoneAvailableAvailablecontig_313575 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----